rs31234741 SNP Detail

Summary

• ID
  rs31234741
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:79422595 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAACATGT CTTACTTGGT
  ACTTTGGAAG CTGTTGCTTA GCGTGTTGTA AAGATCCTCC AAAGCCATGA GAAGAGCTGC
  TGCCGCTGCT GCTGCTGCCG CTGCTGCTGC TGCTTTCCTG ACAGCATCTG GCTGACATTT
  TAATAGGAAC ATCCTCTGCT TTCTGGGTTA AGAGAGGCAG GCAAGGTCAG GGATCATGTA
  S
  TGTACCAGGC TTTATCGGCA TGCTTTATCA AGTGGGAATT GGTCAAAACA TTCAGGTGCC
  TAAATTGCAT TAAAACCAAA ATCTCTGTTT AATTTTTCTT TATAATAACA ACAATATTCA
  TGGGAGTCTG GAATATCTGG GGAGGAGATA CTACCCAGAA AATGGCGGTA CGTGTGTGTA
  GACTGAGACA TGGAGATGGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47031214	NES10776454	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	G	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31234741					SNP	C	C	C	C	C	C	C	C	C	C	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47031214	NES10776454	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79422595 () rs orientation: forward

Symbol	Name	Function Class
Fnip2	folliculin interacting protein 2	within coordinates
Rr77764	regulatory region 77764	1005 bp proximal
Tssr33701	transcription start site region 33701	1041 bp downstream