rs31237194 SNP Detail

Summary

• ID
  rs31237194
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:101900055 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAT CTCGCCCTGG CGCGCGGCTG
  Y
  TTGGAGCGGT AGGACCGCGC CCAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46010958	mCV23440930	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss145564846	ENSMUSSNP3493508	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss322353661	CHEV_7_109399362	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31237194					SNP	C	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:101900055 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19524	CpG island 19524	within coordinates
Rhog	ras homolog family member G	730 bp upstream
Rr652562	regulatory region 652562	771 bp distal
Rr652563	regulatory region 652563	235 bp distal
Rr652564	regulatory region 652564	73 bp proximal
Tssr2354	transcription start site region 2354	572 bp downstream
Tssr68328	transcription start site region 68328	1155 bp downstream
Tssr68329	transcription start site region 68329	1134 bp downstream
Tssr68330	transcription start site region 68330	593 bp downstream
Tssr73939	transcription start site region 73939	1474 bp upstream
Tssr73940	transcription start site region 73940	1427 bp upstream
Tssr73941	transcription start site region 73941	1374 bp upstream
Tssr73942	transcription start site region 73942	1289 bp upstream
Tssr73943	transcription start site region 73943	762 bp upstream
Tssr73944	transcription start site region 73944	725 bp upstream
Tssr73945	transcription start site region 73945	710 bp upstream
Tssr73946	transcription start site region 73946	514 bp upstream
Tssr73947	transcription start site region 73947	369 bp upstream
Tssr73948	transcription start site region 73948	333 bp upstream
Tssr73949	transcription start site region 73949	300 bp upstream
Tssr73950	transcription start site region 73950	253 bp upstream