rs31237991 SNP Detail

Summary

• ID
  rs31237991
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:183976185 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTTGCTCCCC ATTTCCTTCC CCCTTCTCTC CACGTGATCA TGGCCAGCCC CTATTTCTCT
  GCTCTCTCCT TCTCTCTGCC TTTCTCTGCC TCTGCTACTC TCTTAACTCC CCTCCCCATG
  CCCTGAATAA ACTCTATTCT ATATAAAAAG AAAGAGAGAG AGAGAGAGAG AGAGAGAGAG
  AGAAAGAGAA AGAGAGAAAG AGAGAAAGAG AGAAAGAGAG AAAGAGAGAA AGAGAGAAAG
  AGAGAAAGAG AGAAAGAGAG AAAGAGAGAA AGAGAGAAAG AGAGAAAGAG AGAAAGAGAG
  R
  AGAGGAGAGG AGAGGAGAGG AGAGGAGAGG AGAGGAGAGG AGAGGAGAGG AGAGGAGAGG
  AGAGGAGAGG AGAAGAAAAA AAAGTAAGGC CACTGAAGAT GTGTTTGTCA CTCTAACAAA
  ATCCAATACA CAAACCTTTT CCTACATACT TGCTACAGAA GTGCTTGTGG GAAAGTCTGG
  CTTTAAAGAA GCCAGAGAAA TCCATAACTG AGATAGTGAG GAATGCAGAG GTCACCGCTC
  ATTTTAGACA AATCTGAAAT CAAAGTAGCC CCGAGGTGAT GCCATGAAAA TTAGGGGAAT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss45010660	mCV23610406	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss45148860	mCV23610405	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss45166984	mCV23610068	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs31237991					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:183976185 () rs orientation: forward

Symbol	Name	Function Class
Rr425191	regulatory region 425191	284 bp proximal
Rr425192	regulatory region 425192	1380 bp proximal