rs31243474 SNP Detail

Summary

• ID
  rs31243474
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:63143272 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTA AGCTGAATAA ACCCTTTCCT
  Y
  CCCAGTTTAC TTCTTGGTCA TGATG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39269372	mCV23567122	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss139622350	ENSMUSSNP3117357	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss324654092	CHEV_14_63524660	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31243474					SNP	C	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:63143272 () rs orientation: forward

Symbol	Name	Function Class
Tssr126031	transcription start site region 126031	1034 bp upstream
Wdfy2	WD repeat and FYVE domain containing 2	within coordinates