rs31244756 SNP Detail

Summary

• ID
  rs31244756
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:18708283 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGT CTGTGAAATA GGTATTCCTA
  K
  TGTTTATCCT CTGCTTTTTG TCTAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45012203	mCV23325632	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss146149684	ENSMUSSNP2330431	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss325733601	CHEV_19_18805409	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31244756					SNP	G	G	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:18708283 () rs orientation: forward

Symbol	Name	Function Class
Gm23238	predicted gene, 23238	1822 bp upstream
Gm50202	predicted gene, 50202	954 bp downstream
Gm59201	predicted gene, 59201	within coordinates
Tssr155454	transcription start site region 155454	302 bp downstream
Tssr155455	transcription start site region 155455	270 bp downstream
Tssr155456	transcription start site region 155456	230 bp downstream
Tssr155457	transcription start site region 155457	510 bp upstream
Tssr155458	transcription start site region 155458	1821 bp upstream