rs31245964 SNP Detail

Summary

• ID
  rs31245964
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:10156890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAGGCTGAG ATACAGAAGC CCTGTGCCTG CTTTGATTGG
  CACACAGTGG GCTGGGAATC ACTGCCAGGC AATCACTTGG GAGCAGGTGT GCTTGGAGAG
  K
  TGGCCCAAGT GGTGGGTCCA GTCTGGGTGT CTGCTGGCAG GTAGATTCTA TGCAGTGCCA
  AAAGTCTGTC AGTGACTATG ACTCTGCCGC CAGCATCGT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45514355	mCV25352405	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	T
ss134580069	ENSMUSSNP2560102	ENSEMBL	ENSEMBL_Sanger	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs31245964					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10156890 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm37308	predicted gene, 37308			1875 bp upstream
Myef2l	myelin expression factor 2 like			Intron
				Noncoding-Transcript-Variant
Rr573569	regulatory region 573569			710 bp proximal