rs31247058 SNP Detail

Summary

• ID
  rs31247058
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147403924 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTA CCTGTGCCCT CCCAAAGGTG
  M
  AGTAAAGAAG AGAAGAGGCA CTTAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45545744	mCV24069947	ABI	CRAMUS_MOUSE	f	SNP	A	A					C		C
ss47032251	NES10846539	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A		C	C	A	A		C	C	A	C		C
ss136052544	ENSMUSSNP2436557	ENSEMBL	ENSEMBL_Sanger	f	SNP									C
ss321013004	CHEV_3_147361252	CHEVERUD	SCREENING_POP	f	SNP												A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31247058					SNP	A	A	A	A	A	A	C	C	C	A	A	A	C	C	A	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47032251	NES10846539	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147403924 () rs orientation: forward

Symbol	Name	Function Class
D3Mit1002	DNA Segment, Chr 3, Massachusetts Institute of Technology 1002	1515 bp distal
D3Mit1003	DNA segment, Chr 3, Massachusetts Institute of Technology 1003	1376 bp distal