rs31248799 SNP Detail

Summary

• ID
  rs31248799
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19115291 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACGACTGTC TACTGAGGCC
  TGTACCTCAT GAGATGGCTC ATGAGGTACA GGCCTTTTGA CCTGAGTTCG ATTCCCACAC
  ATAGTGGAAG GAAAGGACTG AACCAAATTC TGCAGGTTTC CTCTTCCTTC CACAGGCCAG
  AGGTATTGGA TTCCATGGAG CTAGCCCTAA AGGTGATCGA TCATAAGCTG CCTGATTTGG
  R
  GGGTGGGAGT GGAGAGTGGG GCGGCTGGGA ACCCTGCTCC TCTTCAAAAT CAGAAAGTGC
  TTTTAACTAC TGAGTGATTC CTCCAGGCCC TTAATTAATG AAGTTTTGTT TGTTTGTGAC
  CTATGCTTTA ACGTCTGAGC CATCTTTCCA ACCCATATTA ATAAATGCTT AAAAACACGT
  GCTAGGCAGG GCAGTGGTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss46012082	mCV24423656	ABI	CRAMUS_MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs31248799					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19115291 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18481	CpG island 18481	186 bp proximal
Ercc2	excision repair cross-complementing rodent repair deficiency, complementation group 2	651 bp upstream
Gm26852	predicted gene, 26852	854 bp downstream
Rr400148	regulatory region 400148	422 bp upstream
Tssr64844	transcription start site region 64844	639 bp upstream