rs31251090 SNP Detail

Summary

• ID
  rs31251090
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:44840725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAT AATAATAAAT AAATCTTTTT
  W
  AAAAAAAAGA ATCTTAACTC CAAAA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45012327	mCV22756067	ABI	CRAMUS_MOUSE	f	SNP	T	A	A
ss146441857	ENSMUSSNP6270022	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
ss325819010	CHEV_19_44926776	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31251090					SNP	T	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:44840725 () rs orientation: forward

Symbol	Name	Function Class
D19Mit27	DNA segment, Chr 19, Massachusetts Institute of Technology 27	711 bp proximal
Gm5246	predicted gene 5246	310 bp downstream
Rr394467	regulatory region 394467	1000 bp upstream