rs31252933 SNP Detail

Summary

• ID
  rs31252933
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:157171164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTATTTCTC ACAGCAGAAT AACCTGAAAT TACTGGAATG
  TATTCCCTAA TATGTAATCC TGATTTAAAT ATAGTGTTCC ATTGTTTCCC ATAAGTTTAT
  W
  AAAAATTTAA GCCTACTCAG GTCCTTCCCT CCTATAAAAA TAATTTTCCT AATTCCTGGT
  TCTGACTCAG TCTGACTGTA ACTATCAGCT TTCTGCCAGG                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	FVB/NJ	NZW/LacJ
ss49718493	NES13057109	PERLEGEN	MM_PANEL2	f	SNP	A	T	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	FVB/NJ	NZW/LacJ
rs31252933					SNP	A	T	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49718493	NES13057109	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:157171164 () rs orientation: forward

Symbol	Name	Function Class
Rasal2	RAS protein activator like 2	Intron
Rr421371	regulatory region 421371	924 bp distal
Rr421372	regulatory region 421372	59 bp proximal