rs31253206 SNP Detail

Summary

• ID
  rs31253206
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:190734203 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAACTGAGC CCTCTAAAAT CACAAACAAG TTACATACAT
  CTGTGCTGCA ATGGAATCAA CACCTCCATT CCAAAAAGGA GAACTAAGGA CCTCGTTGTA
  M
  GGAAAGACTA AGGCAAGCCC ATAGCCCGGA AGGGAAAGCA GCAATCCTGA AGCTCTGTGT
  TCAGCATCTG AGGCTAGTGA CAGAATCATC TGGCCTCTA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45012892	mCV25261071	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	C
ss146500604	ENSMUSSNP5919496	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		C
ss320194538	CHEV_1_192825885	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31253206					SNP	A	A	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:190734203 () rs orientation: forward

Symbol	Name	Function Class
Gm8407	predicted gene 8407	155 bp upstream
Gm37095	predicted gene, 37095	1208 bp upstream
Gm70616	predicted gene, 70616	1750 bp upstream
Rr426021	regulatory region 426021	394 bp proximal