rs31253296 SNP Detail

Summary

• ID
  rs31253296
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:86180830 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTTACATC TTTGTCAAAC CTCAGTTGGG ATGGTGTGTT
  TCTAAGTTTT GTTCTATTCC ATGAATTTAT ATATCTGTCC TTCTGATAGC TTCTCATGGT
  W
  TTGATCATTG TAACTGTGTA GAAACCTGGA GTTAGGTAGG CAGATTTCTC CAGCTTTTTC
  TCTTTTAAGA TTGTTTTTCT GTTCTCATTC ATTTCTTTC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45515335	mCV24142041	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
ss135445820	ENSMUSSNP3896492	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss320829508	CHEV_3_86077445	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31253296					SNP	T	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86180830 () rs orientation: forward

Symbol	Name	Function Class
Gm26343	predicted gene, 26343	1709 bp downstream
Lrba	LPS-responsive beige-like anchor	within coordinates