rs31255328 SNP Detail

Summary

• ID
  rs31255328
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45291507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGGATGGAG TCAGGTATTC CAGCCTCTTC CACAATCAGT
  GTCTGAATAT AGCTTTTGGA CGTGTCCTTT TCCCTGGAGT CAGGGGATAC AGATATCACC
  Y
  GGTCCTGTCC CAGGGATATG CTAGATATCT GTGATCCTAA ACAAACGGAC CCTTTGCAGA
  CTAAGTACAA AATGCTCTTC CTTTCTCAAA AATGTGAAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46013360	mCV25292093	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss149139915	ENSMUSSNP772416	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31255328					SNP	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45291507 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19076	CpG island 19076	955 bp proximal
Cpgi19077	CpG island 19077	1989 bp proximal
Mamstr	MEF2 activating motif and SAP domain containing transcriptional regulator	within coordinates
Rr400317	regulatory region 400317	1581 bp upstream
Rr646530	regulatory region 646530	1574 bp distal
Tssr66602	transcription start site region 66602	1644 bp downstream
Tssr66603	transcription start site region 66603	296 bp downstream
Tssr66604	transcription start site region 66604	1870 bp upstream