rs31255907 SNP Detail

Summary

• ID
  rs31255907
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44151819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCACCTAAG AACTATGGCT ACAGATGTGC TTTGACATGC
  CGGGCCTTTT GTTTTTAAAA TTGTTTCTAA TGTTTTAAAT TTATTTATTT TATGTTGAGT
  R
  CATTGTAGTT GTCTTTAGAC ACCCTAGAAG AGGGCATCAG ATTCCATTAA AGATGGCTGT
  GAGCCACCTT GTGGTTGCTG GGAATTGAAC TCAGGACCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46013174	mCV25287576	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss149113638	ENSMUSSNP2437169	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31255907					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44151819 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18970	CpG island 18970	1945 bp distal
Garin5a	golgi associated RAB2 interactor 5A	909 bp downstream
Gm44646	predicted gene 44646	within coordinates
Mybpc2	myosin binding protein C, fast-type	within coordinates
Rr646111	regulatory region 646111	696 bp distal
Rr646112	regulatory region 646112	216 bp distal
Rr646113	regulatory region 646113	466 bp distal