rs31256653 SNP Detail

Summary

• ID
  rs31256653
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55293741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGA TAAGGCCAGT TCATGAGAAG
  Y
  AAGCAGGGCT TTGCTACCTG TGCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39270116	mCV25266497	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
ss139576727	ENSMUSSNP819430	ENSEMBL	ENSEMBL_Sanger	f	SNP			C		C
ss324641940	CHEV_14_55675121	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31256653					SNP	C	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55293741 () rs orientation: forward

Symbol	Name	Function Class
Rr492410	regulatory region 492410	1649 bp distal
Rr492411	regulatory region 492411	781 bp distal
Rr492412	regulatory region 492412	877 bp distal
Rr492413	regulatory region 492413	151 bp distal
Tssr125746	transcription start site region 125746	1409 bp downstream
Tssr125747	transcription start site region 125747	606 bp downstream
Tssr125748	transcription start site region 125748	409 bp downstream