rs31260059 SNP Detail

Summary

• ID
  rs31260059
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:132895749 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTGAAAAGG TGCAACATGA TTTCCAAAAC AATCCTAGAG
  AGATAGCTCA GTGTATAAGG ACACTTGCTG CAAAGCTTGA CAATCATAAC TCAACCCCCC
  S
  CCAAACCTTC ATTATGAAAA GAAAAGAACC AAATCTCACA AGTAGTTCTC TGACCTCCAT
  ACAGGCAGTG CCATACACAT GCACACACTC AATAATATA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46504064	mCV25181975	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	C	G
ss134466868	ENSMUSSNP2612293	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31260059					SNP	G	G	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:132895749 () rs orientation: forward

Symbol	Name	Function Class
Rr6669	regulatory region 6669	842 bp proximal