rs31260437 SNP Detail

Summary

• ID
  rs31260437
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:79693879 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGCCACCGA GCTTCCCTGA
  AGCAGAAACA AAAGGAGACA AAATAAATCT CTCTTAAGTC ATTTCTGTCA GTTTTCTTTT
  CCCTCGTGAT AAGAAAACTA GTTACCACTG TGAGTGAAGC ATGCTAGGTG GAAGAAACCG
  AACTGAGAAG CACGTGGGGT AGACAACTGA GGCAATTCTC CATGATGCCT GGCCTGAGAC
  R
  GAGCATTGTT CCAAGAGGAG CTAGGAGGGA TGAGGGACTA GAAGGGCTAA GCCCTGGGAA
  CTGAGCTAAT GAAGATGAAC AGTTATATGA AAAAGAGAGA GAGAGAGAGT GAGAGTGAGA
  GAGAGAGAGA CAGAGACAGA GAGACAGAGA CAGACAGAGA CAGACAGAGA CAGACAGAGA
  CAGACACAGA GAGAAGAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47033504	NES10773473	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31260437					SNP	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47033504	NES10773473	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79693879 () rs orientation: forward

Symbol	Name	Function Class
Rr578575	regulatory region 578575	1849 bp distal
Rr578576	regulatory region 578576	751 bp proximal