rs31263099 SNP Detail

Summary

• ID
  rs31263099
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:52402224 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACTTCTTTC TTTTTTTCTT TCTTTTTCTT TCTTTCTTTC
  TTTCTTTCTT TCTTTCTTTC TTTCTTTCTT TCTTTCTCCT TTCCTTCCTT TCCTTCCTTT
  Y
  CTTTTCTTTC TTTCTTTTCT TTTTCTTTCT TTTTTTTTGT TTTTTTTGAG ACTGGGTTTC
  TCTATGTAGT GCTGGCTGTC CTGGAACTCA CTGTGTAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss46505692	mCV22641451	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss134173792	ENSMUSSNP3624423	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs31263099					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:52402224 () rs orientation: forward

Symbol	Name	Function Class
Gm14585	predicted gene 14585	1186 bp upstream
Pabir3	PABIR family member 3	within coordinates