rs31263776 SNP Detail

Summary

• ID
  rs31263776
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165915537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACCAAAGTCT CGGAAGATAT CCCAGTTGGT GGAGTACTTA CCCAGCAACT CTTACTGGAG
  GCCCTGAGTC TGATCCTTAG CCCAGAATAA AACTGAGCAT GGTGGTACAA CCCTGTACAG
  CCAGCACTTG GAAGGTGGAA GTAGGTGTAT CAGAAGTAAA AGATCATCAG TGGCTATATA
  GTGAGTTCAA AGCCAGCCTG GAATACATAA GACCCTGTCT CAAAACAAAA TCATATCTAT
  CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCCAT TCACCCATTT ATCTATTCAT
  Y
  CATCCATTTA TCTATTCATC CATCCATTCA TCCATCCATC CATCCATCCA TGTATCTGTT
  ATCTATCTAT CTATCTATCT ATCTATCTAT CTATCTATCT ATCCATTCAC CCATCTATCT
  ATTCATCCAT CTATTCATCC ATCCATCCAT CCATGTATCT GTTATCTATC TATCCATCCA
  CCCATCTATC TATTCATCCA TCCATCCATC TGTCCATCCA TCCATCCATC CATCCATCCA
  TCCATCCATC TATCTATTAT CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45013554	mCV22723365	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31263776					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165915537 () rs orientation: forward

Symbol	Name	Function Class
Rr422527	regulatory region 422527	678 bp proximal
Rr422528	regulatory region 422528	1753 bp proximal