rs31266683 SNP Detail

Summary

• ID
  rs31266683
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:113414443 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAAAGTAGC ATATGAGGTC CCACAGACAA GTGACACTTT
  ATCCAAAGAT GCCTGGAACT GTTCCATATT CCTGCACCCT AAGAAACAGA CAGGTGAGAT
  R
  CATGGCTAAA GCCAGGCTTG TGCTGCCTCA GCCTCACGTG TCTCTCATTT ACTCCTCATC
  CTTCTAGAGT ATTGGGCTTG GGGGGGGGCG GGGATCCTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46014326	mCV23606262	ABI	CRAMUS_MOUSE	f	SNP		G	G					G	A
ss50460083	NES14118637	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	A			G	G		A	G	G	A		G
ss145683878	ENSMUSSNP6739424	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G						A
ss322424743	CHEV_7_120958724	CHEVERUD	SCREENING_POP	f	SNP												G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31266683					SNP	G	G	G	G	G	G	A	G	A	G	G	G	A	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50460083	NES14118637	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:113414443 () rs orientation: forward

Symbol	Name	Function Class
Spon1	spondin 1, (f-spondin) extracellular matrix protein	within coordinates
Tssr74335	transcription start site region 74335	1771 bp downstream