rs31267054 SNP Detail

Summary

• ID
  rs31267054
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:80516351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATCTGTATCA GTATAACGTG GAATATTTGA GCCATGTTTA TTTAAGATCA GAGCTTGAAC
  TTATTCTCAA ACTAACTAAC ATTTAGTTCA GTATAAAGTG ATGTACTTTA ATAGTTCCTC
  AACCTCATCA GTCACTTTGG AAACAAAGAA AACAAAACCA ACAAAAAACA GTAAATGTTA
  TATGGTTTCC AAATAAACTT TGAGTGTTAG TAAGACTAAG TCCATAACCA ACACATCTAA
  CATGTACTGT GAGCACCACC CAGTGGCAGA AACATAGACT AGAGATTTTG TATTTCCTTT
  W
  TTTTTTTTTT TTTTTTTTTT TTTT                                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss46506037	mCV25212228	ABI	CRAMUS_MOUSE	f	SNP	T	A
ss134228564	ENSMUSSNP2058850	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs31267054					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:80516351 () rs orientation: forward

Symbol	Name	Function Class
Rr7859	regulatory region 7859	within coordinates