rs31271293 SNP Detail

Summary

• ID
  rs31271293
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:48817925 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCAA ATTCCTATGG AAATTGGGGG
  R
  AAATGTATGT AAAGTCATTC ACTGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46506470	mCV25124698	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss134168663	ENSMUSSNP2981735	ENSEMBL	ENSEMBL_Sanger	f	SNP			G
ss325889994	CHEV_X_47082225	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31271293					SNP	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:48817925 () rs orientation: forward

Symbol	Name	Function Class
Or5o1	olfactory receptor family 5 subfamily N member 1	1116 bp upstream