rs31271597 SNP Detail

Summary

• ID
  rs31271597
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:35284163 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGTTG ACTTTCATTT CCATGTCGTC
  R
  ATCATCTCGC CCACCTGGAG GACTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46014283	mCV23682744	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss148813178	ENSMUSSNP781423	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss322157980	CHEV_7_36369757	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31271597					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:35284163 () rs orientation: forward

Symbol	Name	Function Class
Ankrd27	ankyrin repeat domain 27	1506 bp upstream
Cpgi18874	CpG island 18874	within coordinates
Rgs9bp	regulator of G-protein signalling 9 binding protein	within coordinates
Rr156307	regulatory region 156307	1563 bp distal
Rr164861	regulatory region 164861	1674 bp distal
Rr167549	regulatory region 167549	within coordinates
Rr400265	regulatory region 400265	1291 bp upstream
Tssr65908	transcription start site region 65908	1494 bp upstream
Tssr65909	transcription start site region 65909	1557 bp upstream
Tssr72043	transcription start site region 72043	803 bp downstream
Tssr72044	transcription start site region 72044	814 bp downstream
Tssr72045	transcription start site region 72045	839 bp downstream