rs31275535 SNP Detail

Summary

• ID
  rs31275535
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138015827 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAAGGACAC CGTGTACATT GATATGCGGT GCAGAGTAAT
  CAGACTTGGC CTCATCTATT TGCATCTACA GGAAAGGCAG GCTTTCAAAG CAAGGCTTGG
  S
  CTTTGGTTGT CTTCAGTGAG CGAGAACTGG CTGAATTGCT CTGAGCACCC CGCCCATTCT
  CACCTTCTCA GAGGCATCCA CATAGCTGCC CGTGATGCT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45516223	mCV23936052	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G
ss135951239	ENSMUSSNP2007449	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss320979276	CHEV_3_137973030	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31275535					SNP	G	G	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138015827 () rs orientation: forward

Symbol	Name	Function Class
Rr586123	regulatory region 586123	1145 bp proximal