rs31278478 SNP Detail

Summary

• ID
  rs31278478
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70834969 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGG ATTCAAAGTG TATGTTGCCA
  Y
  GGGCCAGTTT AGGGCTGTTT TTTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39272568	mCV25261723	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	T
ss139686272	ENSMUSSNP6852219	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31278478					SNP	C	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70834969 () rs orientation: forward

Symbol	Name	Function Class
B930095I24Rik	RIKEN cDNA B930095I24Rik gene	1886 bp upstream
Cpgi6702	CpG island 6702	1559 bp proximal
Fhip2b	FHF complex subunit HOOK interacting protein 2B	Intron
Rr369865	regulatory region 369865	1917 bp upstream
Rr494968	regulatory region 494968	1327 bp proximal