rs31279852 SNP Detail

Summary

• ID
  rs31279852
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45025172 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATTCCACA GACCTTTTTA
  AAATTATCTC CTCAGAAAAG ACTATATACT TGGCATACAT TTGACAGCTT AAGGATAGCT
  TCATCCTCAT TCATCATTTC TGAGGGTTAA GTCCATAGCT ACTTGGCCCC ATATACTTAG
  CAGGAACCTG TGGCATTGCT TCTCATCACA GGATGAGAAG AAACAGCACA ACCCCACCCC
  M
  TAACCATCCC CTAATGAGCT ATTTCCTCCC AGTCCTACCT CTTAAAATCT ATCCAAATGA
  CACTAGCAGT TTGAGACAGA TGTCAAATGT GGCACATGAA GGCAATGTTA AACATCAATT
  CCTGTCTCTA ATGCCTGTCA CAAGTTTTCA TTGCCCCAAG ATTTCTACAG CAAGATGCTC
  TTAGTAAAAC CATAAGCCTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss46015723	mCV22694756	ABI	CRAMUS_MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs31279852					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45025172 () rs orientation: forward

Symbol	Name	Function Class
Snrnp70	small nuclear ribonucleoprotein 70 (U1)	705 bp downstream
Tssr66520	transcription start site region 66520	1422 bp upstream