rs31281659 SNP Detail

Summary

• ID
  rs31281659
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:17812142 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATCTTTTTA CATTAGTGAT TGCATCAATT CAGCGGTCCT
  CTGTAACTAC TGGGATGGCT GTATTTCCAC ATCAGGGTTG TAAAAAACTA CATCAAATAG
  K
  TTTTTCATGT TACGTATATA TAAACTTTCT TAGTATTCTT CTTAACATGA AAAGCTGTAG
  ACCCTCACTA TAAAGGCACT TGTAAAAAGT CTGTAGAGG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45015986	mCV23246987	ABI	CRAMUS_MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs31281659					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:17812142 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10665	CpG island 10665	1020 bp proximal
Cpgi10666	CpG island 10666	1715 bp proximal
Pcsk5	proprotein convertase subtilisin/kexin type 5	within coordinates
Rr544885	regulatory region 544885	767 bp proximal