rs31281717 SNP Detail

Summary

• ID
  rs31281717
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:79956178 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCTCTCTA CTTTCTTTTC
  ACAATATTCC TTAATATATG TATCAAAAAC TCATACCCGA CATTGAGTTC TGACTTATAA
  AAGAGATATT TTTTTTTACA TCAGCCTGTA AGTCTTTGAC CAGAAGTTTC TGTTTTTAAA
  AATGAAGTAA TCTGCCAAAT ACCACAGGAA GCTGCTCTTT TGAAAACAAC TCAACTCTAA
  K
  TACAGACCGA GTAAAAGATT TATTCTTAAG TAAGATGGCT AGAGGGCTCA GTTAAAAGAA
  TGTATTTCTC CTGCACAGGA TCCAAGTTGG GTGTGTGGCA CCTATGCAAG CTCCAGGGTC
  CTATGTCCTC TTCTGGCCTC CACAGGAAGC TGCACTCATA TATATAGGTT CCTACACAGA
  CAAACACATA CAGAATTTTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
ss47036377	NES10761834	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
rs31281717					SNP	G	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47036377	NES10761834	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79956178 () rs orientation: forward

Symbol	Name	Function Class
Gm65495	predicted gene, 65495	within coordinates
Rr578632	regulatory region 578632	120 bp proximal
Rr578633	regulatory region 578633	1187 bp proximal