rs31281727 SNP Detail

Summary

• ID
  rs31281727
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:34080646 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCTCCGCT GCCTCATACT
  TCAGCTCGCA GATCTGAGTT TTTGTACTGT ATACTGTACC CACAAATCCT GCACATGCTG
  AGTCCTCCCA GTCATAGCAG AGCCTTGTTC ATCCAGACTC TCATAGACCT GGCTTGTGGG
  TCACCAGAGG AAGCTACACC CAACAGGCTG TGTCATCTTA CACATATTCA GGCTATCAGC
  R
  AGATTCCTGG TGGAAACCAG AGAGCTCAGA AAGGGACCAT TCACAGGGGC AAACAATAAC
  AGACAGTGGG ACACTAATCA TCAGGAATTA TAGCAACTAT TATCTCTCTA GATATCTCGG
  GGGGACATAA GATCCCTGCC TCCTGGAGCT GTGGCTGTGG AAGAGTCAAG GGACAGAAGC
  TGCCGCCATC ATCCCAGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39272769	mCV25203030	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31281727					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:34080646 () rs orientation: forward

Symbol	Name	Function Class
D14Mit45	DNA segment, Chr 14, Massachusetts Institute of Technology 45	1342 bp distal
Tssr128062	transcription start site region 128062	425 bp upstream
Tssr128063	transcription start site region 128063	357 bp downstream