rs31284072 SNP Detail

Summary

• ID
  rs31284072
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:139390356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    taactaTGA CAGCTTAGTA CAATGATCTC
  AAATCCATTT TCCTAAAAAA GAAAAACATA GTTTATTCTT CATGGTTGAA CAAAGCTTTC
  TTATAAGTAC ATACCGCATT TTCtttttaa tttttatttt actttttaag attttttttt
  K
  tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtt gtgagtgtAG GTTTTTCATA
  aggcccaaag agagtgtcag attcccagga gctggagcta ttagttattg tgagccaacc
  agtgtgagtg ctgggattta ttcaatctat                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss46507268	mCV22818196	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
ss325981188	CHEV_X_137024146	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs31284072					SNP	G	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:139390356 () rs orientation: forward

Symbol	Name	Function Class
Rr5460	regulatory region 5460	1956 bp distal
Rr6758	regulatory region 6758	179 bp distal
Rr9245	regulatory region 9245	1646 bp proximal