rs31284350 SNP Detail

Summary

• ID
  rs31284350
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44839979 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCACAGGCC AGTGAACGTG
  AATGATTACA GACATTAGAG TTGAGTCAGC ATGCGCCTGG CATGCACCAG ATATAAATGT
  TAGAGATGAA CAGTTATAGA TAATTAAAGA AACTCATGCT TCCTAACATA CGAAACTAAA
  GTATAGTGAG CCCAGAATAC TTGCAAGTGC GCGCACGCAC ATGCACACAC ACACACACAC
  R
  CACAGTCTCA ATATATAGCT TGGGCTGGCT TTGAATTTGT AATCCTCCCG CTTTAGCAGG
  AAGGCAGGTA TGAGCCATCA TACCTCACCC TCATGCCCAC TGTAATAACT AGACTTTGGT
  TCCTCCTTTT CTTTATTTCT TTTGCTTTCT TGTCTAACTC AGTCATTTTA TTAAAGCAAA
  TCTCCCATTT TGCCTGGAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46016591	mCV27567971	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31284350					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44839979 () rs orientation: forward

Symbol	Name	Function Class
Gm31097	predicted gene, 31097	within coordinates
Kash5	KASH domain containing 5	within coordinates
Rr646366	regulatory region 646366	1146 bp proximal
Tssr72334	transcription start site region 72334	1842 bp upstream
Tssr72335	transcription start site region 72335	989 bp upstream
Tssr72336	transcription start site region 72336	905 bp upstream
Tssr72337	transcription start site region 72337	842 bp upstream
Tssr72338	transcription start site region 72338	746 bp upstream