rs31285644 SNP Detail

Summary

• ID
  rs31285644
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:15875535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTC CCTGAGCCAC GTCCCAAGCC
  M
  TTTACTGGGG GATTCTAGGC AGAGT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46016295	mCV27566940	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	A
ss148377731	ENSMUSSNP3378603	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		A
ss322108688	CHEV_7_16726959	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31285644					SNP	A	C	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:15875535 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18356	CpG island 18356	399 bp distal
Slc8a2	solute carrier family 8 (sodium/calcium exchanger), member 2	within coordinates