rs31288188 SNP Detail

Summary

• ID
  rs31288188
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37727869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAC ATGAGTCAAG GTCAGAGGAC
  R
  TCTTTGTGGA GTCAGCTCTC ACCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45517382	mCV22777432	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss134810682	ENSMUSSNP833963	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31288188					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37727869 () rs orientation: forward

Symbol	Name	Function Class
Rr374835	regulatory region 374835	within coordinates
Rr406863	regulatory region 406863	within coordinates
Rr575537	regulatory region 575537	270 bp distal
Rr575538	regulatory region 575538	within coordinates
Rr575539	regulatory region 575539	1255 bp proximal
Tssr33054	transcription start site region 33054	1295 bp upstream