rs31290515 SNP Detail

Summary

• ID
  rs31290515
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43213783 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        ACGAG AGGCCCTGAG TTCAAATACC
  Y
  AGCTATCTGA AAAAGGCAGG CTTGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46016858	mCV25343354	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
ss149076662	ENSMUSSNP200621	ENSEMBL	ENSEMBL_Sanger	r	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31290515					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43213783 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi18937	CpG island 18937	1711 bp distal
Rr645991	regulatory region 645991	1234 bp distal
Zfp175	zinc finger protein 175	within coordinates