rs31291668 SNP Detail

Summary

• ID
  rs31291668
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55205759 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTA GGTCTTGCAT GCAGTATTCT
  Y
  CAAGGGACCT GATTCAACCT TGCAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39274692	mCV23144792	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss139574342	ENSMUSSNP197745	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss324641229	CHEV_14_55587139	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31291668					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55205759 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	456 bp upstream
Myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	1375 bp upstream
Rr407057	regulatory region 407057	519 bp distal
Rr492378	regulatory region 492378	1708 bp distal
Rr492379	regulatory region 492379	1171 bp distal
Rr492380	regulatory region 492380	within coordinates
Rr492381	regulatory region 492381	1359 bp proximal
Tssr4419	transcription start site region 4419	2000 bp upstream
Tssr4420	transcription start site region 4420	1887 bp upstream
Tssr4421	transcription start site region 4421	1881 bp upstream
Tssr4422	transcription start site region 4422	1829 bp upstream
Tssr4423	transcription start site region 4423	1803 bp upstream
Tssr4424	transcription start site region 4424	1765 bp upstream
Tssr4425	transcription start site region 4425	1652 bp upstream
Tssr125718	transcription start site region 125718	370 bp upstream
Tssr125719	transcription start site region 125719	449 bp upstream
Tssr125720	transcription start site region 125720	479 bp upstream
Tssr125721	transcription start site region 125721	499 bp upstream
Tssr125722	transcription start site region 125722	924 bp upstream
Tssr125723	transcription start site region 125723	993 bp upstream
Tssr125724	transcription start site region 125724	1005 bp upstream
Tssr125725	transcription start site region 125725	1865 bp upstream
Tssr125726	transcription start site region 125726	1890 bp upstream
Tssr125727	transcription start site region 125727	1923 bp upstream
Tssr128742	transcription start site region 128742	1717 bp upstream
Tssr128743	transcription start site region 128743	1694 bp upstream
Tssr128744	transcription start site region 128744	1365 bp upstream
Tssr128745	transcription start site region 128745	1080 bp upstream
Tssr128746	transcription start site region 128746	327 bp upstream
Tssr128747	transcription start site region 128747	303 bp upstream
Tssr128748	transcription start site region 128748	259 bp upstream
Tssr128749	transcription start site region 128749	228 bp upstream
Tssr128750	transcription start site region 128750	206 bp upstream
Tssr128751	transcription start site region 128751	200 bp upstream
Tssr128752	transcription start site region 128752	141 bp upstream
Tssr128753	transcription start site region 128753	39 bp downstream
Tssr128754	transcription start site region 128754	118 bp downstream