CCCTG TGGTTTTCCA CACATTCTCT M TCCTCTCTTT CCCCTTCACC CTCTA M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss46016475 | mCV25286506 | ABI | CRAMUS_MOUSE | f | SNP | A | C | ||
ss322198946 | CHEV_7_51736350 | CHEVERUD | SCREENING_POP | f | SNP | A | C | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
LG/J |
SM/J |
||||
rs31291793 | SNP | A | C | A | C |
Location: Chr7:44130404 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr646103 | regulatory region 646103 | 1604 bp proximal | ||||||
Tssr2227 | transcription start site region 2227 | 1960 bp downstream | ||||||
Tssr2228 | transcription start site region 2228 | 897 bp downstream | ||||||
Tssr2229 | transcription start site region 2229 | 622 bp downstream | ||||||
Tssr2230 | transcription start site region 2230 | 439 bp downstream | ||||||
Tssr2231 | transcription start site region 2231 | 312 bp downstream | ||||||
Tssr2232 | transcription start site region 2232 | 138 bp downstream | ||||||
Tssr2233 | transcription start site region 2233 | 93 bp downstream | ||||||
Tssr2234 | transcription start site region 2234 | 53 bp upstream | ||||||
Tssr2235 | transcription start site region 2235 | 687 bp upstream | ||||||
Tssr66295 | transcription start site region 66295 | 1745 bp downstream | ||||||
Tssr66296 | transcription start site region 66296 | 1574 bp downstream | ||||||
Tssr66297 | transcription start site region 66297 | 1550 bp downstream | ||||||
Tssr66298 | transcription start site region 66298 | 1495 bp downstream | ||||||
Tssr66299 | transcription start site region 66299 | 1475 bp downstream | ||||||
Tssr66300 | transcription start site region 66300 | 1452 bp downstream | ||||||
Tssr66301 | transcription start site region 66301 | 1436 bp downstream | ||||||
Tssr66302 | transcription start site region 66302 | 1395 bp downstream | ||||||
Tssr66303 | transcription start site region 66303 | 1386 bp downstream | ||||||
Tssr66304 | transcription start site region 66304 | 1381 bp downstream | ||||||
Tssr66305 | transcription start site region 66305 | 1342 bp downstream | ||||||
Tssr66306 | transcription start site region 66306 | 1288 bp downstream | ||||||
Tssr66307 | transcription start site region 66307 | 1239 bp downstream | ||||||
Tssr66308 | transcription start site region 66308 | 1222 bp downstream | ||||||
Tssr66309 | transcription start site region 66309 | 1172 bp downstream | ||||||
Tssr66310 | transcription start site region 66310 | 1103 bp downstream | ||||||
Tssr66311 | transcription start site region 66311 | 1080 bp downstream | ||||||
Tssr66312 | transcription start site region 66312 | 1061 bp downstream | ||||||
Tssr66313 | transcription start site region 66313 | 1051 bp downstream | ||||||
Tssr66314 | transcription start site region 66314 | 1033 bp downstream | ||||||
Tssr66315 | transcription start site region 66315 | 1026 bp downstream | ||||||
Tssr66316 | transcription start site region 66316 | 961 bp downstream | ||||||
Tssr66317 | transcription start site region 66317 | 945 bp downstream | ||||||
Tssr66318 | transcription start site region 66318 | 904 bp downstream | ||||||
Tssr66319 | transcription start site region 66319 | 876 bp downstream | ||||||
Tssr66320 | transcription start site region 66320 | 852 bp downstream | ||||||
Tssr66321 | transcription start site region 66321 | 828 bp downstream | ||||||
Tssr66322 | transcription start site region 66322 | 812 bp downstream | ||||||
Tssr66323 | transcription start site region 66323 | 774 bp downstream | ||||||
Tssr66324 | transcription start site region 66324 | 721 bp downstream | ||||||
Tssr66325 | transcription start site region 66325 | 680 bp downstream | ||||||
Tssr66326 | transcription start site region 66326 | 670 bp downstream | ||||||
Tssr66327 | transcription start site region 66327 | 650 bp downstream | ||||||
Tssr66328 | transcription start site region 66328 | 632 bp downstream | ||||||
Tssr66329 | transcription start site region 66329 | 593 bp downstream | ||||||
Tssr66330 | transcription start site region 66330 | 580 bp downstream | ||||||
Tssr66331 | transcription start site region 66331 | 566 bp downstream | ||||||
Tssr66332 | transcription start site region 66332 | 533 bp downstream | ||||||
Tssr66333 | transcription start site region 66333 | 498 bp downstream | ||||||
Tssr66334 | transcription start site region 66334 | 492 bp downstream | ||||||
Tssr66335 | transcription start site region 66335 | 481 bp downstream | ||||||
Tssr66336 | transcription start site region 66336 | 467 bp downstream | ||||||
Tssr66337 | transcription start site region 66337 | 451 bp downstream | ||||||
Tssr66338 | transcription start site region 66338 | 367 bp downstream | ||||||
Tssr66339 | transcription start site region 66339 | 335 bp downstream | ||||||
Tssr66340 | transcription start site region 66340 | 268 bp downstream | ||||||
Tssr66341 | transcription start site region 66341 | 219 bp downstream | ||||||
Tssr66342 | transcription start site region 66342 | 190 bp downstream | ||||||
Tssr66343 | transcription start site region 66343 | 164 bp downstream | ||||||
Tssr66344 | transcription start site region 66344 | 7 bp downstream | ||||||
Tssr66345 | transcription start site region 66345 | 9 bp upstream | ||||||
Tssr66346 | transcription start site region 66346 | 65 bp upstream | ||||||
Tssr66347 | transcription start site region 66347 | 103 bp upstream | ||||||
Tssr66348 | transcription start site region 66348 | 144 bp upstream | ||||||
Tssr66349 | transcription start site region 66349 | 168 bp upstream | ||||||
Tssr66350 | transcription start site region 66350 | 196 bp upstream | ||||||
Tssr66351 | transcription start site region 66351 | 204 bp upstream | ||||||
Tssr66352 | transcription start site region 66352 | 240 bp upstream | ||||||
Tssr66353 | transcription start site region 66353 | 314 bp upstream | ||||||
Tssr66354 | transcription start site region 66354 | 328 bp upstream | ||||||
Tssr66355 | transcription start site region 66355 | 355 bp upstream | ||||||
Tssr66356 | transcription start site region 66356 | 372 bp upstream | ||||||
Tssr66357 | transcription start site region 66357 | 386 bp upstream | ||||||
Tssr66358 | transcription start site region 66358 | 398 bp upstream | ||||||
Tssr66359 | transcription start site region 66359 | 424 bp upstream | ||||||
Tssr66360 | transcription start site region 66360 | 436 bp upstream | ||||||
Tssr66361 | transcription start site region 66361 | 462 bp upstream | ||||||
Tssr66362 | transcription start site region 66362 | 494 bp upstream | ||||||
Tssr66363 | transcription start site region 66363 | 511 bp upstream | ||||||
Tssr66364 | transcription start site region 66364 | 544 bp upstream | ||||||
Tssr66365 | transcription start site region 66365 | 564 bp upstream | ||||||
Tssr66366 | transcription start site region 66366 | 584 bp upstream | ||||||
Tssr66367 | transcription start site region 66367 | 612 bp upstream | ||||||
Tssr66368 | transcription start site region 66368 | 634 bp upstream | ||||||
Tssr66369 | transcription start site region 66369 | 668 bp upstream | ||||||
Tssr66370 | transcription start site region 66370 | 710 bp upstream | ||||||
Tssr66371 | transcription start site region 66371 | 1135 bp upstream | ||||||
Tssr66372 | transcription start site region 66372 | 1298 bp upstream | ||||||
Tssr66373 | transcription start site region 66373 | 1588 bp upstream | ||||||
Tssr66374 | transcription start site region 66374 | 1646 bp upstream | ||||||
Tssr66375 | transcription start site region 66375 | 1657 bp upstream | ||||||
Tssr66376 | transcription start site region 66376 | 1670 bp upstream | ||||||
Tssr66377 | transcription start site region 66377 | 1709 bp upstream | ||||||
Tssr66378 | transcription start site region 66378 | 1731 bp upstream | ||||||
Tssr66379 | transcription start site region 66379 | 1743 bp upstream | ||||||
Tssr66380 | transcription start site region 66380 | 1776 bp upstream | ||||||
Tssr66381 | transcription start site region 66381 | 1795 bp upstream | ||||||
Tssr66382 | transcription start site region 66382 | 1819 bp upstream | ||||||
Tssr66383 | transcription start site region 66383 | 1929 bp upstream | ||||||
Tssr72202 | transcription start site region 72202 | 1172 bp upstream | ||||||
Tssr72203 | transcription start site region 72203 | 792 bp upstream | ||||||
Tssr72204 | transcription start site region 72204 | 192 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 07/22/2025 MGI 6.24 |
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