rs31291875 SNP Detail

Summary

• ID
  rs31291875
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:116695754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAAACATAA TATATACATG TATATGTATA TACACATTTA
  TATACATGAA TATATACATA TATACTTATA TATACCTATA TATTATACAC ATATAGTCCA
  Y
  ATTAAACATA TATATTAAAC ATTAAATATT TTTATTTGTA AATTTACACA TAAGTATATA
  TATGTATATA TATACATATG CATCCCTAGA GCTGGGATT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	DBA/2J
ss45518849	mCV24793225	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	DBA/2J
rs31291875					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116695754 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Frrs1	ferric-chelate reductase 1			Intron
				Noncoding-Transcript-Variant
Rr583800	regulatory region 583800			1984 bp proximal
Tssr31391	transcription start site region 31391			1472 bp upstream
Tssr31392	transcription start site region 31392			1558 bp upstream
Tssr31393	transcription start site region 31393			1592 bp upstream
Tssr31394	transcription start site region 31394			1614 bp upstream