rs31292096 SNP Detail

Summary

• ID
  rs31292096
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135109942 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCTGCTTGC CTATGTTTTC TGTTCTGTGG TCTGGAGCCT
  GGGCCTGGGG AGGGGCAGGT CCCCCTAGGT ATTTGGAGTA GAACTCCTGG GTTGTTTGGG
  R
  ACCCTTTCCT TACTTCACAA CCCAACTGGG TCTCTTGTCT CCTCCCTAGA AGAGATGCAG
  GGATAGATGA GGCTTTGGGA AGGTTGGTCC CTGGAAGCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45017003	mCV25393545	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss145526796	ENSMUSSNP5827325	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs31292096					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135109942 () rs orientation: forward

Symbol	Name	Function Class
Gm70872	predicted gene, 70872	1789 bp upstream
Gm70875	predicted gene, 70875	487 bp downstream
Rr419095	regulatory region 419095	within coordinates
Rr419096	regulatory region 419096	1299 bp proximal
Rr419097	regulatory region 419097	1868 bp proximal
Tssr13831	transcription start site region 13831	1310 bp upstream