rs31295122 SNP Detail

Summary

• ID
  rs31295122
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:99769773 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAG AGAGAGAGAA AAATGGATAA
  R
  TGTAGTATGG GGTAATTTCA AGAAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss46017747	mCV23563828	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss145524281	ENSMUSSNP5401133	ENSEMBL	ENSEMBL_Sanger	f	SNP			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs31295122					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:99769773 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19477	CpG island 19477	286 bp proximal
Pold3	polymerase (DNA-directed), delta 3, accessory subunit	within coordinates
Rr400466	regulatory region 400466	864 bp upstream
Rr652064	regulatory region 652064	67 bp proximal
Rr652065	regulatory region 652065	890 bp proximal
Tssr73730	transcription start site region 73730	17 bp upstream
Tssr73731	transcription start site region 73731	480 bp downstream
Tssr73732	transcription start site region 73732	866 bp downstream
Tssr73733	transcription start site region 73733	880 bp downstream
Tssr73734	transcription start site region 73734	946 bp downstream