rs31295725 SNP Detail

Summary

• ID
  rs31295725
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147976684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAACTTGA GAGAGTAGAT
  ACTGCTGCTA GTCAGAGTGT GGCAGATACA GAGAGAACCC AGAAAGACCC CTCTCGTCTC
  TAAGTAAATA AATCTACTTT CATTGTTTAC ATTAATGGGC TCTGGAATCT ACCCAAATGT
  GATTGAAATC AAAGTATCCT TTACACATCC CAAATATACT GCATTCATCT TTATCCCTGG
  R
  CACCAGTAGC CGGTTTATGC AGTGTTTTAA TTGTTTATTT TATTAAACCA CATAGAACAG
  GCTATACTGC CTTTTCATTA TTATAAACTA AAGTTATGGT GACTCAGGAA TATTTCATAG
  AGGGAAATGA GATGTAATGA GACCTCTCTT CCAAATTCAA TGTTTTTGGT AAAAGTGGCC
  TGAAACATTT CATTTACCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47037261	NES10847991	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31295725					SNP	G	G	G	G	G	A	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47037261	NES10847991	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147976684 () rs orientation: forward

Symbol	Name	Function Class
Rr587183	regulatory region 587183	908 bp proximal
Rr587184	regulatory region 587184	1522 bp proximal