rs31296195 SNP Detail

Summary

• ID
  rs31296195
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:12567869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTTC TCCTTTGACC TCAGCTACTA
  M
  GAAACCACAA CCAACCTCCT CCCTA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss46018197	mCV23047058	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
ss148340637	ENSMUSSNP355138	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss322106492	CHEV_7_13419291	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs31296195					SNP	A	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:12567869 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18318	CpG island 18318	609 bp proximal
Rr642383	regulatory region 642383	329 bp proximal
Rr642384	regulatory region 642384	983 bp proximal
Rr642385	regulatory region 642385	1051 bp proximal
Rr642386	regulatory region 642386	1552 bp proximal
Tssr64479	transcription start site region 64479	801 bp upstream
Tssr64480	transcription start site region 64480	1031 bp upstream
Tssr64481	transcription start site region 64481	1306 bp upstream
Zfp110	zinc finger protein 110	819 bp upstream