rs31297612 SNP Detail

Summary

• ID
  rs31297612
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137041328 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTGGGAACC TGAGAGCAAC TGGTAGCTAG AAGAGGACAT
  CAGATTGCCC CTGGAACTGG AGTTACATGT GATTTTTAGT GCAGAGAACC ATATCAAGGT
  Y
  GTCTGCACGT GCAAGGGGTG CTCTAAATCC CTGAGGCATG TGTCCAGCAC TAAATCTCAC
  ACTTGTACAT GGAGGAATTC AACAATTTTA AAAGATGTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45520332	mCV23606902	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss320975337	CHEV_3_136998531	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31297612					SNP	T	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137041328 () rs orientation: forward

Symbol	Name	Function Class
Tssr35852	transcription start site region 35852	560 bp downstream