rs31298879 SNP Detail

Summary

• ID
  rs31298879
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3770537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGTT TATTTTGCTC TAAATTCCCC
  M
  GCATTACTGC TGGAAGAACC TATGC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39275468	mCV24347126	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	C	A
ss139182374	ENSMUSSNP372951	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31298879					SNP	A	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3770537 () rs orientation: forward

Symbol	Name	Function Class
6820402I19Rik	RIKEN cDNA 6820402I19 gene	668 bp downstream
Rr389165	regulatory region 389165	1618 bp upstream
Ube2e2	ubiquitin-conjugating enzyme E2E 2	within coordinates