rs31301651 SNP Detail

Summary

• ID
  rs31301651
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:120233751 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACCAACCA GGCAGCATAC
  ATGAGCTAGT CCGAGGTCCC AACATATATA CAGCAGAGGA CTACCTGGTC TGGCCTCAGT
  GGGAGAAGAG GCACCTAACT TGAGAAACGA GGCCCCAGGG AGTACTGAGG CCTGGCGGGG
  GCATCCTCTT AGAGAAGGGG TAGGAGGAAT GGGATGAGGA ACTGTGGGAG GGGCGGACCG
  K
  GAATCTGGCA ACGACTGGAC TGTAAAAAAA ATAAAAGTAA CCAAAAACAT TTTTAAGCAG
  CTATGCGGCT TCATGAAAGC AGTGGTTCCC GAATTAGTCT CAATCATAGT GTAACACACG
  AATGATTTGT GCCATATGTC TGTATCACCA ACAGTTAAAC ATTTTTAAGT ACAATAGAAG
  ACTATATTAA GTCCCTGATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46018268	mCV22887056	ABI	CRAMUS_MOUSE	f	SNP	G	T	G	G
ss145823104	ENSMUSSNP3946892	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31301651					SNP	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:120233751 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19646	CpG island 19646	175 bp proximal
Gm45112	predicted gene 45112	within coordinates
Rr654734	regulatory region 654734	1685 bp distal
Rr654735	regulatory region 654735	1800 bp distal
Rr654736	regulatory region 654736	158 bp proximal
Rr654737	regulatory region 654737	659 bp proximal
Tssr68788	transcription start site region 68788	672 bp upstream
Uqcrc2	ubiquinol cytochrome c reductase core protein 2	661 bp upstream