rs31305064 SNP Detail

Summary

• ID
  rs31305064
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:80192421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTGTGTCA TTGAGAACAA
  AATCTCTAAA TTTATAGCAT ATAAACAGAA TACTTCATTA GGAGGATTTT CTCTATGACA
  ATAAATGACA TGGTTTATTA TGAAAAGGCT AGGTTCACAC ATCCATTTAT CTTCTCTCAG
  CACCACAACC AAAGTAAGAA CAAAGAGAGT TATTAGATCC CAACTATTTG AAGACACTTT
  M
  CACACACTGG ATTTCAGAAT GTTTATTAAG ATTGGAAAGT TTTGAAGAAA GAAATCAGCA
  GATTTTCTCT CATATAAATA TCTAACATGT AGAAATTGTA TATTTTTCTT GTTAATTACC
  TCATGGACTT TCTGTGATCA TCATTTTATG TTTGAGAATA TTTCTCTGCG TGAAGTCCCT
  GTGTATTAGT AAATATTGAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47038257	NES10753749	PERLEGEN	MM_PANEL2	f	SNP	C	A	A	A	A	A	A	A	C	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31305064					SNP	C	A	A	A	A	A	A	A	C	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47038257	NES10753749	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:80192421 () rs orientation: forward

Symbol	Name	Function Class
Gm37971	predicted gene, 37971	9 bp downstream