rs31305360 SNP Detail

Summary

• ID
  rs31305360
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:101437115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATGA TACCCAACAC CACATAAGCA
  Y
  GACATGCTGG CATGAGCCTG CAATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39275936	mCV25403235	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss146736127	ENSMUSSNP7196178	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss324798518	CHEV_14_101598896	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31305360					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:101437115 () rs orientation: forward

Symbol	Name	Function Class
Prr30	proline rich 30	within coordinates
Tssr126900	transcription start site region 126900	641 bp downstream
Tssr130022	transcription start site region 130022	760 bp upstream
Tssr130023	transcription start site region 130023	720 bp upstream
Tssr130024	transcription start site region 130024	606 bp upstream
Tssr130025	transcription start site region 130025	635 bp downstream
Tssr130026	transcription start site region 130026	670 bp downstream