rs31306142 SNP Detail

Summary

• ID
  rs31306142
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:122118867 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACACTTT GAGACAACCT
  GTGATGACAT TAAAGATATC TCTAAGATGA TGATAGGATT TGAGTTTGCC TTTGAAGAAA
  TGAAGTTCAA GAAGAATGAC ATTTATGGAG AAGACTAACA GCAGTGCATA TTGTGTAATT
  TGGACAAACT TAAAATTTGA CAAATAATTT ATATTTATGA AATCAATAAA GTAAGCCCTG
  Y
  TTTTATGATA AAAATGGAAA TTTAAGAGTG TTATAGCAGT GAATACTCCT CCACTTTTCT
  AATATCATGT ATTAAGTTGT TTCATGGAAT AGCTAGTCAG AACTGGTTGT TTCTATTCAG
  TTTAACCAGA CTGCATTATT TTTCTAGTGA AGGAGCTGTT CCAAACAAAT ATTGATATTG
  ATACAGAAAA CTTGATACAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45018513	mCV24160345	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss145342409	ENSMUSSNP2975678	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31306142					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:122118867 () rs orientation: forward

Symbol	Name	Function Class
Gm8392	predicted gene 8392	86 bp downstream