rs31316595 SNP Detail

Summary

• ID
  rs31316595
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:7665507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGAG TGGCATAGGA TGTAAGGTGA
  Y
  GCTGACACCC AGGGCCGCGG GGGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39276821	mCV24310287	ABI	CRAMUS_MOUSE	f	SNP		C	T				C
ss51189958	NES14316955	PERLEGEN	MM_PANEL2	f	SNP	C		T	T	T	C	C	T	T	C	C	T
ss139100821	ENSMUSSNP5507760	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31316595					SNP	C	C	T	T	T	C	C	T	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51189958	NES14316955	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:7665507 () rs orientation: forward

Symbol	Name	Function Class
Nek10	NIMA (never in mitosis gene a)- related kinase 10	within coordinates
Rr290587	regulatory region 290587	707 bp distal
Tssr124320	transcription start site region 124320	112 bp downstream