rs31318701 SNP Detail

Summary

• ID
  rs31318701
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:78963811 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTATGGGG TGGGCCCTCC ACTGGTAAAA ATAGCCTCTG
  TACGTAGTGT TGACATGCTG CTTTCCCAGC CTTTGTTTTC TAGGCTCAAA GTGCTCAAGT
  K
  GGTGAGACCT CGGATGGAAG CAGCTCCAGA AGGCCTACTC AAGAGAAGGA GACCTGCAAG
  CTCTACATAG CTTCCAAGTT AGTGATTCGG TCTACATTA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46512650	mCV24448792	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
ss325899160	CHEV_X_77165544	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31318701					SNP	T	T	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:78963811 () rs orientation: forward

Symbol	Name	Function Class
Rr395274	regulatory region 395274	within coordinates
Tssr163724	transcription start site region 163724	1721 bp upstream