rs31319365 SNP Detail

Summary

• ID
  rs31319365
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:120685818 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGCTTGTG TGAGCTTCCT
  CTAAGTATGA AATGTAAATC TCCTATGTAG AATGTTTATG TTGTCAATAT TTTTTTTTTA
  CACATCTGTG GTCACCACCA TCAATATCCC CAAACACCTG AGTCAATCAG CTAATAGAGA
  GGAAAGGCTT ATTTTAGCTC ACGGATTTGA AGGCTCCTCA GTGATAGGTT GGTGCCTGCA
  R
  TGAGACAGCA CATTGTGTTT GGAATGTTTA GTGGCGCATA ACTGCTCATC TCACCTGCCA
  GAAAGCAGGA GAGGAAGAGG GAGGCTCTGG AATGCCACAT CTCCTCTGAG AACAGCCTTA
  GTGACCCAAC AGAGAACATT TCCACAAAGG TTCCTCTCAA AGGCTCCACT ACGTCCCATG
  GAAGATGTGG CATCCTGGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss46019686	mCV27548749	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss145826773	ENSMUSSNP5211380	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs31319365					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:120685818 () rs orientation: forward

Symbol	Name	Function Class
Otoa	otoancorin	within coordinates
Rr153325	regulatory region 153325	618 bp distal
Rr159723	regulatory region 159723	183 bp proximal
Rr168965	regulatory region 168965	219 bp distal